1. Physical principles for scalable neural recording Maguire, Yael G, Shapiro, Mikhail G, Cybulski, Thaddeus R, Glaser, Joshua I, Amodei, Dario, Stranges, P Benjamin, Kalhor, Reza, Dalrymple, David A, Seo, Dongjin, Alon, Elad, and others, Frontiers in computational neuroscience 2013


  1. Decide now or decide later?: Quantifying the tradeoff between prospective and retrospective access decisions Zhang, Wen, Chen, You, Cybulski, Thaddeus, Fabbri, Daniel, Gunter, Carl, Lawlor, Patrick, Liebovitz, David, and Malin, Bradley In Proceedings of the 2014 ACM SIGSAC Conference on Computer and Communications Security 2014


  1. Spatial information in large-scale neural recordings Cybulski, Thaddeus R, Glaser, Joshua I, Marblestone, Adam H, Zamft, Bradley M, Boyden, Edward S, Church, George M, and Kording, Konrad P Frontiers in computational neuroscience 2015


  1. Nucleotide-time alignment for molecular recorders Cybulski, Thaddeus R, Boyden, Edward S, Church, George M, Tyo, Keith EJ, and Kording, Konrad P PLoS computational biology 2017
  2. Toward the Statistical and Biological Realization of DNA Polymerase as a Molecular Recorder and Cybulski, Thaddeus R 2017
  3. Scalable passive sleep monitoring using mobile phones: opportunities and obstacles Saeb, Sohrab, Cybulski, Thaddeus R, Schueller, Stephen M, Kording, Konrad P, and Mohr, David C Journal of medical Internet research 2017


  1. High-resolution mapping of DNA polymerase fidelity using nucleotide imbalances and next-generation sequencing Paz, Alexandra M, Cybulski, Thaddeus R, Marblestone, Adam H, Zamft, Bradley M, Church, George M, Boyden, Edward S, Kording, Konrad P, and Tyo, Keith E J Nucleic acids research 2018
  2. Development of novel metabolite-responsive transcription factors via transposon-mediated protein fusion Younger, Andrew KD, Su, Peter Y, Shepard, Andrea J, Udani, Shreya V, Cybulski, Thaddeus R, Tyo, Keith EJ, and Leonard, Joshua N Protein Engineering, Design and Selection 2018